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Multi-store Shopify Apps

Discover the best Multi-store apps for your Shopify store in 2025. Compare features, pricing, and reviews to find the perfect solution.

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We've analyzed thousands of multi-store apps to identify the top performers based on ratings and install counts.

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Automate your ecommerce orders by connecting to hundreds of fulfillment and POD integrations! Order Desk is an order management app that lets merchants, artists, and suppliers automate their order fulfillment workflow using our Rule Builder and hundreds of integrated services including shopping carts and marketplaces, print on demand fulfillment partners, shipping companies, CRMs and more. Order Desk is an order management app that lets merchants, artists, and suppliers automate their order fulfillment workflow using our Rule Builder and hundreds of integrated services including shopping carts and marketplaces, print on demand fulfillment partners, shipping companies, CRMs and more. more Use the Rules Engine to automate your orders based on any set of criteria Connect to hundreds of integrations—shipping, fulfillment, print on demand, etc. Completely Customizable—There's something for every unique order workflow

4.9(Reviews)

Split & route orders to multiple vendors and 3PL, with multi-store order management & inventory sync Do you need to split and send orders to multiple warehouses or stores, vendors, or 3PL’s based on advanced rules? Do you need to sync orders, products and inventory between stores? Save time and automatically split and route orders with Order Fulfillment Guru, a multi-store Order Management System (OMS) built for Shopify. Enable real-time product, inventory and order sync between Shopify stores. Trusted by merchants with multiple stores or warehouses, dropshippers, and multivendor marketplaces. Do you need to split and send orders to multiple warehouses or stores, vendors, or 3PL’s based on advanced rules? Do you need to sync orders, products and inventory between stores? Save time and automatically split and route orders with Order Fulfillment Guru, a multi-store Order Management System (OMS) built for Shopify. Enable real-time product, inventory and order sync between Shopify stores. Trusted by merchants with multiple stores or warehouses, dropshippers, and multivendor marketplaces. more Automate order routing by assigning order locations, partners, 3PLs using rules Split & send orders to other Shopify stores via email, web portal, ShipStation Real-time product, inventory and order syncing between Shopify stores Instead of all orders, send specific orders to your or partner's ShipStation Prepaid shipping, auto-invoice, B2B payment terms, wholesale prices, AfterSell

5.0(Reviews)

Automated Exchanges. Powerful Help Desk software. Unlimited Tickets, Agents & Automations. All-in-1. Outvio offers a powerful Exchanges and Returns management tool and a groundbreaking Help Desk platform for your Shopify store. Complete with a fully branded self-service portal for your customers, live chat and easy-to-use ticketing management for all contact channels. Outvio also allows you to efficiently automate your entire post-purchase workflow, encompassing order fulfilment, shipping, tracking, and customer communication. Truly everything you need, in one single easy-to-use platform. Outvio offers a powerful Exchanges and Returns management tool and a groundbreaking Help Desk platform for your Shopify store. Complete with a fully branded self-service portal for your customers, live chat and easy-to-use ticketing management for all contact channels. Outvio also allows you to efficiently automate your entire post-purchase workflow, encompassing order fulfilment, shipping, tracking, and customer communication. Truly everything you need, in one single easy-to-use platform. more Returns and Exchanges, Upselling with instant Checkout within the Returns Portal Refunds to Store Credit, Giftcards, built-in Pickup & Return Label generation HelpDesk and Ticketing software with Unlimited agents, tickets and automations Live-Chat. Single Inbox for Email, SMS, WhatsApp and Social Media conversations Smart Fulfilment & Shipping (90+ couriers), fully branded Delivery Tracking

3.3(Reviews)

Turn messy data into automated workflows. No code required. Parabola is a workflow builder that makes it easy to organize and transform messy data from anywhere—even PDFs, emails, and spreadsheets—so you can automate the work you thought would always be manual. Teams at fast-moving Shopify brands use Parabola to save hundreds of hours and finally take on the projects that used to feel out of reach. Whether it’s reconciling inventory or monitoring for SKUs with low inventory, Parabola gives teams the power to automate it—all without IT support. Parabola is a workflow builder that makes it easy to organize and transform messy data from anywhere—even PDFs, emails, and spreadsheets—so you can automate the work you thought would always be manual. Teams at fast-moving Shopify brands use Parabola to save hundreds of hours and finally take on the projects that used to feel out of reach. Whether it’s reconciling inventory or monitoring for SKUs with low inventory, Parabola gives teams the power to automate it—all without IT support. more Automate complex processes to save time, avoid errors, and alert your team Leverage AI to organize messy data across emails, PDFs, and spreadsheets Reconcile orders and inventory levels between Shopify and systems like NetSuite Set up custom alerts for unfulfilled Shopify orders or low inventory levels Combine Shopify data with data from other sources in your stack

5.0(Reviews)

All your data in one analytics platform. Export, report, analyze, and explore your data. Try it now. Connect all your sources of data together to understand how to grow your profit. Analyze multiple stores, marketing channels, and more like Amazon, Etsy and more. See how your Google Ads or Facebook Ads are performing on ROAS. Analyze your UPS labels or ShipStation costs. Connect your Stripe, Braintree, or PayPal accounts so you can analyze gateway fees and understand Gross Margin % or Profit. Get your Ecommerce Dashboard setup & working for your business! Connect all your sources of data together to understand how to grow your profit. Analyze multiple stores, marketing channels, and more like Amazon, Etsy and more. See how your Google Ads or Facebook Ads are performing on ROAS. Analyze your UPS labels or ShipStation costs. Connect your Stripe, Braintree, or PayPal accounts so you can analyze gateway fees and understand Gross Margin % or Profit. Get your Ecommerce Dashboard setup & working for your business! more Unlock your data and access mission critical information to grow your business. Export your date and integrate it with other mission critical services. Analyze your business, products, customers, and get your team on the same page. Share and export your reports to PDF, Excel, CSV, Google Sheets. Scheduled reports are automatically sent via email or to Google Sheets.

5.0(Reviews)

Picqer is warehouse software for online stores. Gain control and run a professional operation. Picqer helps you make the processes in your warehouse smarter and more efficient. With Picqer you work more calmly, walk less, eliminate unnecessary work and do things first time right. As a result, you process orders faster with the same team, without having to work harder. Picqer helps you make the processes in your warehouse smarter and more efficient. With Picqer you work more calmly, walk less, eliminate unnecessary work and do things first time right. As a result, you process orders faster with the same team, without having to work harder. more Stock & Location Management Picklists & Smart Picking Routes Purchasing & Receiving Inventory Shipment & Returns Reports & Automations

4.2(Reviews)

pimsimple provides product & media management functionality, unifying data from disperate sources. pimsimple is a cost-effective Product Information Management (PIM) system in the market, ideal for manufacturers, distributors, retailers, digital and marketing agencies. It uses state-of-the-art technology, yet is effortless and easy for users to get operational quickly. It's a PIM which has been made with the user in mind regardless of the size of your business. pimsimple is a cost-effective Product Information Management (PIM) system in the market, ideal for manufacturers, distributors, retailers, digital and marketing agencies. It uses state-of-the-art technology, yet is effortless and easy for users to get operational quickly. It's a PIM which has been made with the user in mind regardless of the size of your business. more Combine products from different sources, including files & direct integration. Import and manage media from cloud storage or existing URLs. Completely flexible data model which you control.

0.0(Reviews)

Order Management and Integrations for Mid-Market and Enterprise DTC, POS and B2B Sellers With Pipe17, Shopify brands can confidently sell on every channel—wholesale or retail—while keeping fulfillment costs down! Built to meet the demands of high performance sellers for more scale, reliability and automation in their B2B and DTC order operations. Flow orders, fulfillments, inventory, products, returns, payments, payment statuses, statements, customers, companies, locations, terms, catalogs, pricing, and deposits between Shopify and your marketplaces, fulfillment centers, and ERPs. With Pipe17, Shopify brands can confidently sell on every channel—wholesale or retail—while keeping fulfillment costs down! Built to meet the demands of high performance sellers for more scale, reliability and automation in their B2B and DTC order operations. Flow orders, fulfillments, inventory, products, returns, payments, payment statuses, statements, customers, companies, locations, terms, catalogs, pricing, and deposits between Shopify and your marketplaces, fulfillment centers, and ERPs. more Connect and Automate Complex B2B and DTC Flows Between Your Applications Hold, Split and Route B2B and DTC Orders Across Your Fulfillment Centers Post Updates to Your ERP and Data Warehouse in Realtime Automate Kit and Bundle Handling between Shopify and Your Fulfillment Centers Keep Inventory Levels in Sync between Shopify, your channels and your ERP

4.9(Reviews)

Play Or Draw Inventory Sync keeps your inventory current across both platforms Play Or Draw Inventory Sync allows merchants on the Play Or Draw platform to keep their inventory up to date and automatically synced across both platforms. Play Or Draw Inventory Sync allows merchants on the Play Or Draw platform to keep their inventory up to date and automatically synced across both platforms. more Minimal and easy setup Full inventory imports once onboarded Consistent and reliable syncing between both platforms

0.0(Reviews)

AI Inventory Management & Planner. Forecasting, Multi-Location Restocking, Purchase Orders, Reports. AI-powered inventory forecasting, planning & purchase order management in one app 📈. Save time daily & replace spreadsheets with an advanced inventory management app that syncs with Shopify in real time. Automated inventory alerts & stock health indicators help you create data-driven purchase orders in seconds to avoid out of stock & overstock. Upload your raw material catalogue, BOM & bulk-edit your product settings. Create & export detailed inventory reports in CSV & PDF 📄. AI-powered inventory forecasting, planning & purchase order management in one app 📈. Save time daily & replace spreadsheets with an advanced inventory management app that syncs with Shopify in real time. Automated inventory alerts & stock health indicators help you create data-driven purchase orders in seconds to avoid out of stock & overstock. Upload your raw material catalogue, BOM & bulk-edit your product settings. Create & export detailed inventory reports in CSV & PDF 📄. more AI Sales Forecasting to Plan Demand For SKU & Product => View Demo Store Inventory Planning with Out of Stock Alerts & Buying Planner => View Demo Store Create, track & bulk edit POs in simple PO management system => View Demo Store Accurate Inventory reports (CSV or PDF) with 100+ filters for customization Create your bill of materials & order components for your finished goods

4.9(Reviews)

Easily bulk edit products, variants, and metafields to save time and reduce manual work. Managing large product catalogs manually can be time-consuming and error-prone. Products Bulkify Editor helps you bulk edit product data like prices, inventory, titles, and metafields using advanced filters such as tags, vendors, and product types. Schedule edits to run automatically, undo changes instantly, and track edit history. Export data with CSV — all with a simple interface that requires no coding. Managing large product catalogs manually can be time-consuming and error-prone. Products Bulkify Editor helps you bulk edit product data like prices, inventory, titles, and metafields using advanced filters such as tags, vendors, and product types. Schedule edits to run automatically, undo changes instantly, and track edit history. Export data with CSV — all with a simple interface that requires no coding. more Bulk edit product fields, variants, and metafields efficiently Schedule bulk edits to run daily, weekly, or monthly Filter products by tags, types, vendors, and more before editing Undo any bulk edit and restore your previous product data Simple interface designed for merchants of all skill levels

4.1(Reviews)

One-click profit calculations with detailed analytics and breakdowns. Make smarter/faster decisions. Skip the messy spreadsheets and get vital profit calculations and insights in one click. Making it easy to understand your store's financial performance. Get real-time reports and breakdowns for your store by order, by product, or overall. We sync with all your essential ad platforms (e.g. Facebook, Google, and more). We're also configured to work with stores that use VAT (Value Added Tax) or COD (cash on delivery). You can even view multiple stores together or separately in the same report. Skip the messy spreadsheets and get vital profit calculations and insights in one click. Making it easy to understand your store's financial performance. Get real-time reports and breakdowns for your store by order, by product, or overall. We sync with all your essential ad platforms (e.g. Facebook, Google, and more). We're also configured to work with stores that use VAT (Value Added Tax) or COD (cash on delivery). You can even view multiple stores together or separately in the same report. more Skip the spreadsheets and get automatic calculations with profit analysis. Advanced calculations, insights, and metrics. All in a customizable dashboard. Syncs with Facebook, Google, Bing, Tik Tok, Snapchat, and Pinterest ads. Aliexpress, Printful, Printify, CJ Dropshipping, Shiphero, Shipbob, and Shippo Uses historical currency rates along with real-time exchange rates.

5.0(Reviews)

Get your Finances in order and learn how much net profit your business actually made today. Profitario automatically imports your data from sources like Shopify, AliExpress, Facebook Ads, PayPal and more to make the process of reporting your net profit, margins, disputes and customer life time value as seamless as possible. Over are the days where you had to spend hours just to find out how much money your store actually made in a give day. Profitario automatically imports your data from sources like Shopify, AliExpress, Facebook Ads, PayPal and more to make the process of reporting your net profit, margins, disputes and customer life time value as seamless as possible. Over are the days where you had to spend hours just to find out how much money your store actually made in a give day. more Automate your profit reporting and use our smart integrations to save your time. Use one of our many Integrations or Chrome Extensions to simplify your workflow. Trust your numbers and grow you business with confidence.

4.5(Reviews)

Auto PayPal Tracking Sync to Build your trust with PayPal, Reduce Money on Hold & get Funds Faster. Proveway syncs PayPal tracking from Shopify on autopilot. Syncing PayPal Tracking enables PayPal algorithms to track successful deliveries. Which avoids unwanted disputes, money on hold & reserves. By syncing PayPal tracking with Proveway your business becomes transparent! Proveway provides massive ROI on your time and turns on PayPal Seller Protections for each transaction as soon it syncs tracking to your PayPal account. Proveway syncs PayPal tracking from Shopify on autopilot. Syncing PayPal Tracking enables PayPal algorithms to track successful deliveries. Which avoids unwanted disputes, money on hold & reserves. By syncing PayPal tracking with Proveway your business becomes transparent! Proveway provides massive ROI on your time and turns on PayPal Seller Protections for each transaction as soon it syncs tracking to your PayPal account. more Auto - Stripe & PayPal Tracking Sync to Avoid Being Prone to Random Holds! Past Order Sync - Process past 3 Month Orders in 1 Click. Digital Order PayPal Tracing Sync, Courier Mapping & PayPal Courier Match. Insight of orders shipments in 1 clicks across 900+ Couriers. Brand page tracking page so customers can track the status of their order.

5.0(Reviews)

Staff time-tracking app built exclusively for POS retailers. POS Time Tracker is an easy-to-use time-tracking app built into Shopify POS and Shopify Admin. Staff can clock in and out directly from any Shopify POS device. Managers can easily track staff hours and generate reports from Shopify admin. No third-party sites to sign into. POS Time Tracker is an easy-to-use time-tracking app built into Shopify POS and Shopify Admin. Staff can clock in and out directly from any Shopify POS device. Managers can easily track staff hours and generate reports from Shopify admin. No third-party sites to sign into. more Integrated Time Clock - Staff can clock in and out directly from Shopify POS. Managers can easily track staff hours and generate reports from Shopify Admin. Multi-Location Support - Manage clock-ins and clock-outs for multiple locations. No Setup Required - Your staff can start tracking time immediately after install Chat Support - We are happy to assist via our live in-app chat widget.

4.7(Reviews)

Multichannel inventory & order management, B2B wholesale, and accounting sync—simplified with Qoblex Qoblex’s inventory management software gives you complete control over your supply chain, from inventory and order fulfillment to forecasting and manufacturing—all in one platform. Gain real-time insights and leverage inventory-based analytics to make data-driven decisions that drive growth. Plus, our robust B2B eCommerce Platform seamlessly integrates with your operations, making scaling easier than ever. Unlock your potential and experience the future of inventory management with Qoblex! Qoblex’s inventory management software gives you complete control over your supply chain, from inventory and order fulfillment to forecasting and manufacturing—all in one platform. Gain real-time insights and leverage inventory-based analytics to make data-driven decisions that drive growth. Plus, our robust B2B eCommerce Platform seamlessly integrates with your operations, making scaling easier than ever. Unlock your potential and experience the future of inventory management with Qoblex! more Link and manage multiple sales channels & warehouses under one dashboard. Full traceability with serial number, batch/lot number & expiry date tracking. Fulfill retail and wholesale orders in different currencies, prices, and terms. Workflow automation to streamline your procurement and manufacturing processes. Integrations with Xero, QuickBooks Online, and more!

4.5(Reviews)

Sync sales data to QuickBooks in an automated manner - individual orders or summary sync options Sync sales data to QuickBooks Online easily in an automated manner - Individual orders OR Summary sync options. With Individual Orders you can export all your Orders, Products & Customer data to QuickBooks Automatically. You can sync data to QuickBooks automatically or prefer to do it manually at your convenience. With Summary Sync our app will create one entry for each Payout from Shopify. and will create one entry per day for each of the other payment methods. Sync sales data to QuickBooks Online easily in an automated manner - Individual orders OR Summary sync options. With Individual Orders you can export all your Orders, Products & Customer data to QuickBooks Automatically. You can sync data to QuickBooks automatically or prefer to do it manually at your convenience. With Summary Sync our app will create one entry for each Payout from Shopify. and will create one entry per day for each of the other payment methods. more Individual Order Sync - Includes Customer, Products, Taxes and All details Summary Invoice Sync - Create Invoice by Payment method for Easy Reconciliation Automated Sync Process Very Easy Reconciliation

4.9(Reviews)

Sync sales to QuickBooks Desktop in an automated manner - Sync individual orders Sync sales data to QuickBooks Desktop or Enterprise editions easily in an automated manner - Sync Individual orders With Individual Orders you can export all your Orders, Products & Customer data to QuickBooks Automatically. You can sync data to QuickBooks automatically or prefer to do it manually at your convenience. Summary Sync: With Summary Sync our app will create one entry for each Payout from Shopify and one entry per day for each of the other payment methods. Sync sales data to QuickBooks Desktop or Enterprise editions easily in an automated manner - Sync Individual orders With Individual Orders you can export all your Orders, Products & Customer data to QuickBooks Automatically. You can sync data to QuickBooks automatically or prefer to do it manually at your convenience. Summary Sync: With Summary Sync our app will create one entry for each Payout from Shopify and one entry per day for each of the other payment methods. more Individual Order Sync - Includes Customer, Products, Taxes and All details Automated Sync Process Very Easy Reconciliation Summary Invoice Sync - Sync Daily Summary or Settlement Summary

5.0(Reviews)

Connect with QuickBooks Desktop/POS. Sales and inventory sync in minutes with Shoplink Integrator! Effortlessly Sync your store with QuickBooks Desktop or Point of Sale. Shoplink Integrator makes connecting your store with QuickBooks Desktop easy and reliable. Automatically sync orders, customers, inventory, and pricing — without the hassle of manual entry. Designed for growing businesses, Shoplink keeps your accounting accurate and up-to-date, so you can focus on what matters most: running your store. Effortlessly Sync your store with QuickBooks Desktop or Point of Sale. Shoplink Integrator makes connecting your store with QuickBooks Desktop easy and reliable. Automatically sync orders, customers, inventory, and pricing — without the hassle of manual entry. Designed for growing businesses, Shoplink keeps your accounting accurate and up-to-date, so you can focus on what matters most: running your store. more Instantly sync Shopify sales, inventory, and customers to QuickBooks Desktop Works with QuickBooks Pro, Premier, Enterprise, and Point of Sale (POS) Eliminate manual data entry errors and save hours every week Customize mapping for products, taxes, and discounts White glove onboarding with US-based 5-star support

5.0(Reviews)

Imports your orders, POS, refunds, customers, payment fees and products seamlessly into QuickBooks Multiple Stores? You can connect multiple Shopify stores to a single QuickBooks company. Tax compliance: This integration features Full, Comprehensive Tax Support - US and Canada Sales Tax (including State/County/Municipal/Provincial Tax), Australian & New Zealand GST, UK & European VAT, etc. Comprehensive streamlining: Import payment transaction fees in addition to orders, refunds, payments, customers and items. Prevent duplication: existing customers and items in QuickBooks are matched Multiple Stores? You can connect multiple Shopify stores to a single QuickBooks company. Tax compliance: This integration features Full, Comprehensive Tax Support - US and Canada Sales Tax (including State/County/Municipal/Provincial Tax), Australian & New Zealand GST, UK & European VAT, etc. Comprehensive streamlining: Import payment transaction fees in addition to orders, refunds, payments, customers and items. Prevent duplication: existing customers and items in QuickBooks are matched more Import orders, POS sales and sales from other channels as QuickBooks Invoices Import payments and payment transaction fees Import refunds/returns as QuickBooks Credit Notes Multi-currency support Compatible with QuickBooks Tax Automation for US businesses

0.0(Reviews)

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About Multi-store Apps for Shopify

Multi-store apps are essential tools for Shopify merchants looking to enhance their store's functionality and improve customer experience. These specialized applications help store owners streamline operations, increase sales, and provide better service to their customers.

When choosing a multi-store app for your Shopify store, consider factors such as features, pricing, customer support, and compatibility with your theme and other apps. Reading reviews from other merchants can also provide valuable insights into the app's performance and reliability.

The apps listed on this page represent some of the best multi-store solutions available in the Shopify App Store. Each has been selected based on its functionality, user ratings, and overall value for Shopify merchants.